Complexity management and analysis of genomic DNA
    35.
    发明授权
    Complexity management and analysis of genomic DNA 有权
    基因组DNA的复杂性管理与分析

    公开(公告)号:US07267966B2

    公开(公告)日:2007-09-11

    申请号:US09904039

    申请日:2001-07-12

    IPC分类号: C12P19/34 C12Q1/68

    摘要: The present invention provides for novel methods of sample preparation and analysis involving reproducibly reducing the complexity of a nucleic sample. The invention further provides for analysis of the above sample by hybridization to an array which may be specifically designed to interrogate the desired fragments for particular characteristics, such as, for example, the presence or absence of a polymorphism. The invention further provides for novel methods of using a computer system to model enzymatic reactions in order to determine experimental conditions before conducting actual experiments.

    摘要翻译: 本发明提供了重复地降低核酸样品的复杂性的样品制备和分析的新方法。 本发明进一步提供了通过与阵列的杂交来分析上述样品,所述阵列可被特别设计成询问特定特征的期望片段,例如多态性的存在或不存在。 本发明进一步提供了使用计算机系统来模拟酶反应以便在进行实际实验之前确定实验条件的新方法。

    Nucleic acid affinity columns
    38.
    发明授权
    Nucleic acid affinity columns 有权
    核酸亲和柱

    公开(公告)号:US06280950B1

    公开(公告)日:2001-08-28

    申请号:US09429521

    申请日:1999-10-28

    IPC分类号: C12Q168

    摘要: This invention provides nucleic acid affinity matrices that bear a large number of different nucleic acid affinity ligands allowing the simultaneous selection and removal of a large number of preselected nucleic acids from the sample. Methods of producing such affinity matrices are also provided. In general the methods involve the steps of a) providing a nucleic acid amplification template array comprising a surface to which are attached at least 50 oligonucleotides having different nucleic acid sequences, and wherein each different oligonucleotide is localized in a predetermined region of said surface, the density of said oligonucleotides is greater than about 60 different oligonucleotides per 1 cm2, and all of said different oligonucleotides have an identical terminal 3′ nucleic acid sequence and an identical terminal 5′ nucleic acid sequences; b) amplifying said multiplicity of oligonucleotides to provide a pool of amplified nucleic acids; and c) attaching the pool of nucleic acids to a solid support.

    摘要翻译: 本发明提供了携带大量不同核酸亲和配体的核酸亲和基质,允许同时从样品中选择和除去大量预选核酸。 还提供了生产这种亲和基质的方法。 通常,所述方法包括以下步骤:a)提供核酸扩增模板阵列,其包含与至少50个具有不同核酸序列的寡核苷酸连接的表面,并且其中每个不同的寡核苷酸定位在所述表面的预定区域中, 所述寡核苷酸的密度大于每平方厘米约60个不同的寡核苷酸,并且所有所述不同的寡核苷酸具有相同的末端3'核酸序列和相同的末端5'核酸序列; b)扩增所述多重寡核苷酸以提供扩增核酸的库; 和c)将核酸池连接到固体支持物上。